Top 10 Marathon Shores Hotels of 2026

A beach with clear turquoise water, palm trees, and people enjoying the sand and sea.

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Our top choices for Marathon Shores hotels

A balcony with a view of the ocean, a round table, and two chairs.

1. Fairfield Inn & Suites by Marriott Marathon Florida Keys

1.9 km from Marathon Shores

Andrew

includes taxes & fees

27 Oct - 28 Oct

A pool area with lounge chairs, a thatched-roof structure, and a view of the ocean.

2. Hampton Inn Marathon - Florida Keys

2.1 km from Marathon Shores

Linda

includes taxes & fees

27 Oct - 28 Oct

A covered outdoor seating area with tables and chairs, overlooking a body of water and a distant shoreline.

3. Bonefish Bay Motel

1.6 km from Marathon Shores

Billy

includes taxes & fees

29 Oct - 30 Oct

A hammock on a sandy beach with palm trees, a pool, and lounge chairs in the background.

4. Seascape Resort & Marina

2.5 km from Marathon Shores

PAOLA

includes taxes & fees

28 Oct - 29 Oct

A covered outdoor area with a view of a pool and palm trees.

5. Kingsail Resort

2.9 km from Marathon Shores

Nicholas

includes taxes & fees

9 Nov - 10 Nov

A pool area with lounge chairs and umbrellas, a thatched-roof structure, and a view of the ocean.

6. Glunz Ocean Beach Hotel & Resort

2.5 km from Marathon Shores

Judy

includes taxes & fees

27 Oct - 28 Oct

A marina with a dock, a boat, and a row of buildings with large windows.

7. Coconut Cay Resort & Marina

2.8 km from Marathon Shores

Oscar

includes taxes & fees

27 Oct - 28 Oct

A clear blue pool with white lounge chairs and palm trees, overlooking a calm sea.

8. Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys

7 km from Marathon Shores

amy

includes taxes & fees

2 Nov - 3 Nov

A marina with boats docked, a swimming pool, and a building with a blue roof.

9. Faro Blanco Resort Marathon Florida Keys, Curio by Hilton

7.1 km from Marathon Shores

Rick

includes taxes & fees

15 Nov - 16 Nov

An outdoor seating area with wicker furniture and cushions, a thatched-roof structure, and lush greenery.

10. Tropical Cottages

3.6 km from Marathon Shores

Aaron

includes taxes & fees

27 Oct - 28 Oct

A building with a white exterior, purple doors, and a small patio area with chairs and a table.

11. Siesta Motel

2.6 km from Marathon Shores

Jairo

includes taxes & fees

8 Nov - 9 Nov

A spacious living area with a gray sectional sofa, wooden beams, and a ceiling fan.

12. Aqua Lodge Rentals At Coconut Cay

2.7 km from Marathon Shores

Susan

includes taxes & fees

27 Oct - 28 Oct

A wooden deck with two chairs and a table, overlooking a beach with palm trees and the ocean.

13. Rainbow Bend Resort

8.5 km from Marathon Shores

mark

includes taxes & fees

29 Oct - 30 Oct

A small boat house named "SEACOVE" with a dock extending into calm water, surrounded by pebbles and rocks.

14. Floating Sea Cove Resort & Marina

2.4 km from Marathon Shores

Leidis

includes taxes & fees

15 Nov - 16 Nov

A clear view of a swimming pool with lounge chairs and umbrellas, surrounded by palm trees and a clear sky.

15. Banana Bay Resort & Marina

5 km from Marathon Shores

Alex

includes taxes & fees

15 Nov - 16 Nov

A nighttime pool area with a clear view of the pool, surrounding palm trees, and a building with a sign.

16. Skipjack Resort & Marina

4.8 km from Marathon Shores

Justin

includes taxes & fees

27 Oct - 28 Oct

A swimming pool surrounded by palm trees and lounge chairs.

17. Tranquility Bay Beachfront Hotel and Resort

6.6 km from Marathon Shores

Stuart

includes taxes & fees

16 Nov - 17 Nov

A coastal landscape with clear turquoise waters and a dense tree line under a bright blue sky with scattered clouds.

18. Captain Pips Marina & Hideaway

7.5 km from Marathon Shores

michael

includes taxes & fees

27 Oct - 28 Oct

A modern kitchen with white cabinets, a microwave, and a dining area with a table and chairs.

19. Yacht Haven Marina

4.3 km from Marathon Shores

Lauren

includes taxes & fees

27 Oct - 28 Oct

A tropical resort with a swimming pool, palm trees, and a view of the ocean.

20. Gulf View Waterfront Resort

9.9 km from Marathon Shores

includes taxes & fees

27 Oct - 28 Oct

View all properties

Compare popular hotels in Marathon Shores

Property	Property class	Guest rating
Fairfield Inn & Suites by Marriott Marathon Florida Keys	3.0 star property	9.2 Wonderful 1,237 reviews	View
Bonefish Bay Motel	2.5 star property	9.2 Wonderful 662 reviews	View
Hampton Inn Marathon - Florida Keys	2.5 star property	9.0 Wonderful 1,004 reviews	View
Seascape Resort & Marina	3.0 star property	9.4 Exceptional 646 reviews	View
Kingsail Resort	2.0 star property	8.6 Excellent 1,135 reviews	View

Where to stay in Marathon Shores

Find the best Marathon Shores areas for the activities you enjoy most.

An aerial view of a coastal area with a large bay, several islands, and a densely populated shoreline.

Little Venice

While there might not be top attractions in Little Venice, you can explore the larger area and discover places like Captain Hooks Marina and Dive Center and Sunset Park Beach.

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A sailboat with white sails on a turquoise sea, a beach with palm trees, and a partly cloudy sky.

Coral Lagoon

Coral Lagoon might not have many top sights, but Captain Hooks Marina and Dive Center and Sunset Park Beach are two attractions nearby that you can check out.

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An aerial view of a coastal town with a beach, clear turquoise waters, and a small island.

Farara Shores

Farara Shores might not have many top sights, but Captain Hooks Marina and Dive Center and Sunset Park Beach are two attractions nearby that you can check out.

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Top Marathon Shores Hotel Reviews

Tranquility Bay Beachfront Hotel and Resort

10/10 Excellent

"Perfect place for a family vacation. We loved everything about it"

Yacht Haven Marina

10/10 Excellent

"It was exactly what you see in the pictures. The only thing I would advise is listing the plumbing situation. We had absolutely no problem with it. However if people are looking for legitimate in door plumbing keep in mind this is a boat so it is just a little under par. But still functional. Great place and plan on staying there again. The wild life was spectacular."

Gulf View Waterfront Resort

10/10 Excellent

"This was a really cute place to stay. Only complaint I have is our bathroom was incredibly small and slightly dirty still and the beds had others peoples hair in them which is pretty off-putting. I’m not super grossed out bc i just assume the mop left things behind or the hair just got tangled up in the linens bc of the washing machine, but I can see other people having a big issue with this. Overall though, we enjoyed our stay. The pool was great, the decks were so cool to fish off and see all the jelly fish. A great property with a lot of potential."

Frequently asked questions

What is Marathon Shores like?

Travellers to Marathon's Marathon Shores neighbourhood will be sure to enjoy a stay here. Make sure that you visit Captain Hooks Marina and Dive Center and Marathon Air Museum as part of your Marathon Shores travel plans.

How many hotels will I find in Marathon Shores?

If you're searching for places to stay in Marathon, Expedia has something to meet your needs with 195 Marathon Shores hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Marathon Shores, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable if cancelled before the hotel's cancellation deadline, which is often 24 or 48 hours before your arrival date. If your reservation is non-refundable, it might still be possible to cancel it and get a refund within 24 hours of booking. Put your dates in and click on "Search", then filter by "fully refundable" to view top deals in Marathon Shores.

What can I see and do in this Marathon neighbourhood?

A few attractions you might want to check out while you're in Marathon Shores are Captain Hooks Marina and Dive Center and Marathon Air Museum. Sunset Park Beach and Coco Plum Beach are also worth a visit when you're out sightseeing in Marathon.

Hotels in Marathon Shores

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Our top choices for Marathon Shores hotels

1. Fairfield Inn & Suites by Marriott Marathon Florida Keys

2. Hampton Inn Marathon - Florida Keys

3. Bonefish Bay Motel

4. Seascape Resort & Marina

5. Kingsail Resort

6. Glunz Ocean Beach Hotel & Resort

7. Coconut Cay Resort & Marina

8. Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys

9. Faro Blanco Resort Marathon Florida Keys, Curio by Hilton

10. Tropical Cottages

11. Siesta Motel

12. Aqua Lodge Rentals At Coconut Cay

13. Rainbow Bend Resort

14. Floating Sea Cove Resort & Marina

15. Banana Bay Resort & Marina

16. Skipjack Resort & Marina

17. Tranquility Bay Beachfront Hotel and Resort

18. Captain Pips Marina & Hideaway

19. Yacht Haven Marina

20. Gulf View Waterfront Resort

Compare popular hotels in Marathon Shores

Where to stay in Marathon Shores

Little Venice

Coral Lagoon

Farara Shores

Top Marathon Shores Hotel Reviews

Tranquility Bay Beachfront Hotel and Resort

Frequently asked questions

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