Hotels near Shelter Island

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14 Dec - 15 Dec
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15 Dec - 16 Dec
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19 Dec - 21 Dec
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26 Dec - 28 Dec

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Our top choices for Shelter Island hotels

Theatre show
Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1354)
"Great place to stay at!"
United States
Sandy
The price is S$235
includes taxes & fees
23 Dec - 24 Dec
Homewood Suites by Hilton San Diego Airport/Liberty Station
Exterior
Bay Club Hotel & Marina

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3185)
"Great stay and location!"
United States
Jason
The price is S$184
includes taxes & fees
4 Jan - 5 Jan, 2026
Bay Club Hotel & Marina
Outdoor pool
Humphreys Half Moon Inn

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2695)
"Great stay"
United States
Michael
The price is S$247
includes taxes & fees
16 Dec - 17 Dec
Humphreys Half Moon Inn
Exterior
 Hampton Inn & Suites San Diego Airport Liberty Station

 Hampton Inn & Suites San Diego Airport Liberty Station

 Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1701)
"Excellent place "
Mexico
Rafael
The price is S$201
includes taxes & fees
21 Dec - 22 Dec
 Hampton Inn & Suites San Diego Airport Liberty Station
View from property
Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1368)
"Lovely place to stay!"
United States
Helga
The price is S$215
includes taxes & fees
21 Dec - 22 Dec
Courtyard by Marriott San Diego Airport/Liberty Station
BBQ/picnic Area
TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1002)
"Great place to stay! Breakfast was fantastic every day."
United States
Mandy
The price is S$239
includes taxes & fees
21 Dec - 22 Dec
TownePlace Suites by Marriott San Diego Airport/Liberty Station
Reception
Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
8.8 out of 10, Excellent, (1559)
"Staff was great, easy check in and great location"
United States
Alysa
The price is S$170
includes taxes & fees
4 Jan - 5 Jan, 2026
Best Western Plus Island Palms Hotel & Marina
Exterior
Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1223)
"Great hotel"
United States
Maria G
The price is S$242
includes taxes & fees
21 Dec - 22 Dec
Hilton San Diego Airport/Harbor Island
Marina
Sea Harbor Hotel

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1004)
"Great stay"
United States
Naomi
Sea Harbor Hotel
Desk, blackout curtains, iron/ironing board, cots/infant beds
Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1637)
"The breakfast options were good and the staff were very helpful."
Canada
Gail or Rob
The price is S$145
includes taxes & fees
16 Dec - 17 Dec
Best Western Yacht Harbor Hotel
Property amenity
The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.6 out of 10, Excellent, (620)
"Staff, room cleanliness, location all excellent! I definitely hope to be back soon!"
United States
Wesley
The price is S$189
includes taxes & fees
21 Dec - 22 Dec
The Monsaraz San Diego, Tapestry Collection by Hilton
Front of property
The Pearl Hotel

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.6 out of 10, Excellent, (1005)
"Lovely spot would stay again "
United States
danixa
The price is S$201
includes taxes & fees
4 Jan - 5 Jan, 2026
The Pearl Hotel
2 outdoor pools, open 6:00 AM to 10:00 PM, pool cabanas (surcharge)
Kona Kai San Diego

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very good, (1000)
"had a wonderful time for our honey moon here "
United States
Anna
The price is S$301
includes taxes & fees
10 Jan - 11 Jan, 2026
Kona Kai San Diego
Golf
DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.2 out of 10, Very good, (1005)
"Clean room and lobby, friendly staff, great menu in on-site cafe, convenient shuttles. "
United States
TobiElizabeth
The price is S$188
includes taxes & fees
1 Jan - 2 Jan, 2026
DoubleTree by Hilton San Diego Bayside
Exterior
Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1184)
"Great location on the bay and close to the airport "
United States
Shawn
The price is S$122
includes taxes & fees
4 Jan - 5 Jan, 2026
Comfort Inn San Diego Airport At The Harbor
In-room safe, individually decorated, individually furnished, desk
Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.4 out of 10, Good, (1004)
"Close to airport and the water, free on site parking."
United States
Christina
The price is S$132
includes taxes & fees
21 Dec - 22 Dec
Ramada by Wyndham San Diego Airport
Blackout curtains, iron/ironing board, free WiFi, bed sheets
Hotel Point Loma

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (346)
"Great staff and very friendly "
United States
Nalani
Hotel Point Loma
Front of property – evening/night
Hotel Aqua Mar

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1001)
"A/C / Heat works great!"
United States
Candice
Hotel Aqua Mar
Front of property
Sunrise Inn San Diego

Sunrise Inn San Diego

Sunrise Inn San Diego
2.0 star property
1.2 km from Shelter Island
5.6 out of 10, (1003)
"For the price and location this hotel is great. My go to when I’m down in San Diego and don’t want to break the bank "
United States
carmina
Sunrise Inn San Diego
Free WiFi, bed sheets
Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (371)
"My stay was awesome"
United States
Fred
Samesun Ocean Beach - Hostel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Shelter Island Hotel Reviews

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station

10/10 Excellent
"Clean room, great breakfast, great location, we can’t wait to come back! "
jacqueline 2-night trip
Posted 3 days ago
Homewood Suites by Hilton San Diego Airport/Liberty Station

Hotels near other Shelter Island attractions

Sunset Cliffs Natural Park, San Diego, California

Sunset Cliffs Natural Park

You can take time to visit Sunset Cliffs Natural Park during your travels to San Diego. Wander the seaside and beautiful beaches in the area.
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Favorite sunset
Photo by Bikini Traveler
Open Photo by Bikini Traveler

Breakers Beach

Why not spend a lazy afternoon at Breakers Beach during your trip to San Diego? Experience the acclaimed theatre scene and entertainment choices in this walkable area.
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Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 44 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Kona Kai San Diego.
How many hotels will I be able to find near Shelter Island?
Expedia has 44 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.

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